Mucin |
Species |
|
Protein Sequence |
Length |
|
mRNA Sequence |
|
DNA Sequence |
|
Note |
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ciMucMV1 |
ciona intestinalis |
|
fasta |
|
domain |
>1334 |
|
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scaffold_609+, <0.1Mbp (v39.195b) |
|
|
Lost PTS in version
40.2b. Ensembl reference: version 39.195b GENSCAN00000085991. |
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ciMucMV2 |
ciona intestinalis |
|
fasta |
|
domain |
1098 |
|
fasta |
plain |
|
scaffold_220-,
~0.1Mbp (v40.2b) |
|
|
Two exons in PTS. Gap in
3rd VWD in genomic sequence. Ensembl reference: version 40.2b
GENSCAN00000088682. |
|
|
|
|
|
ciMucMV3 |
ciona intestinalis |
|
fasta |
|
domain |
1469 |
|
|
|
|
scaffold_223-, <0.1Mbp (v39.195b) |
|
|
Lost PTS and 3rd VWD in
version 40.2b. Ensembl_reference: version 39.195b ENSCINP00000001406. |
|
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|
|
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|
ciMucMV4 |
ciona intestinalis |
|
fasta |
|
domain |
1275 |
|
|
|
|
scaffold_16+, ~0.2Mbp (v39.195b) |
|
|
Lost 1st VWD in version
40.2b. Ensembl_reference: version
39.195b ENSCINP00000016240. |
|
|
|
|
|
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|
ciMucMV5 |
ciona intestinalis |
|
fasta |
|
domain |
3425 |
|
fasta |
plain |
|
chr10q-, ~3.4Mbp
(v40.2b) |
|
|
One-exon PTS. Ensembl
reference: version 40.2b GENSCAN00000090826. |
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ciMucMV6 |
ciona intestinalis |
|
fasta |
|
domain |
1769 |
|
fasta |
plain |
|
scaffold_26-,
~0.3Mbp (v40.2b) |
|
|
One-exon PTS. PTS is
small. Ensembl reference: version 40.2b GENSCAN00000077236. |
|
|
|
|
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|
ciMuc4 |
ciona intestinalis |
|
fasta |
|
domain |
2643 |
|
fasta |
plain |
|
chr6q-, ~2.2Mbp (v40.2b) |
|
|
Eight exons in PTS.
Ensembl reference: version 40.2b GENSCAN00000100929. |
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ciMucMS |
ciona intestinalis |
|
fasta |
|
domain |
5109 |
|
|
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|
scaffold_88-, ~0.1Mbp (v39.195b) |
|
|
Lost SEA, VWD and TM in
version 40.2b. 31 EGF domains. Ensembl reference: version 39.195b
GENSCAN00000010060. |
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EXPLANATION OF ANNOTATION |
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