Mucin |
Species |
|
Protein Sequence |
Length |
|
mRNA |
|
DNA |
|
Note |
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1 |
human |
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fasta |
gcg |
domain |
1255 |
|
fasta |
plain |
|
Chr1q22- |
fasta |
|
NCBI reference: AAA60019(mRNA: J05582). |
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Variant CT58 |
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domain |
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plain |
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Variant CT80 |
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domain |
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plain |
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Variant SEC |
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domain |
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plain |
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Variant X |
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domain |
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plain |
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Variant Y |
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domain |
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plain |
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Variant ZD |
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domain |
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plain |
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2 |
human |
|
fasta |
gcg |
domain |
5179 |
|
fasta |
plain |
|
Chr11p15.5+ |
fasta |
|
NCBI reference: Q02817, AAB95295(mRNA: L21998),
NP_002448(mRNA: NM_002457). |
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3(A) |
human |
|
fasta |
gcg |
domain |
>2541 |
|
fasta |
plain |
|
Chr7q22.1+ |
fasta |
|
PTS is not complete. NCBI reference:Part1:
AAQ73824(DNA: AY307930), Part2: AAC02268(mRNA: AF007190), Part3:
AAC02271(mRNA: AF007193), Part4: AAC02272(mRNA: AF007194), AAF13032(DNA:
AF113616). |
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3B |
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fasta |
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??? |
|
fasta |
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NCBI reference: Part1: AAQ73825(mRNA:
AY307931) Part2: BAB12117(mRNA: AB038783). Other MUC3B: CAC19572(DNA:
AJ391390), BAB12115(DNA: AB038781). |
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Variant SEC |
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fasta |
gcg |
domain |
>2281 |
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fasta |
plain |
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The 2nd exon after PTS is alternative spliced
out and the protein stops at the 4th exon after PTS. NCBI reference:
AAC02272(mRNA: AF007194). |
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4 |
human |
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fasta |
gcg |
domain |
5284 |
|
fasta |
plain |
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Chr3q29- |
fasta |
|
NCBI reference: CAB81773(mRNA: AJ276359),
NP_060876(mRNA: NM_018406), AAA63230(mRNA: M64594). |
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5AC |
human |
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fasta |
gcg |
domain |
>5350 |
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fasta |
plain |
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Chr11p15.5+ |
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Genomic DNA is missing. NCBI reference: Part1:
CAC83674(mRNA: AJ298317), Part2: CAC83675(mRNA: AJ298318), Part3:
CAC83676(mRNA: AJ298319), Part4: CAA04737(mRNA: AJ001402). |
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5B |
human |
|
fasta |
gcg |
domain |
5703 |
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Chr11p15.5+ |
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Genomic DNA and mRNA are missing. NCBI
reference: Q9HC84. |
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6 |
human |
|
fasta |
gcg |
domain |
2439 |
|
fasta |
plain |
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Chr11p15.5- |
fasta |
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NCBI reference: XP_290540(mRNA: XM_290540.4). |
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7 |
human |
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fasta |
gcg |
domain |
377 |
|
fasta |
plain |
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Chr4q13.3+ |
fasta |
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NCBI reference: AAH25688(mRNA: BC025688). |
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8 |
human |
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fasta |
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2699 |
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fasta |
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Chr12q24- |
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Maybe not mucin protein although called MUC8
(no signal sequence). NCBI reference: AAX21802(mRNA: AY945262). |
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9 |
human |
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OVGP1(oviductal glycoprotein 1). NCBI
reference: NP_002548(mRNA: NM_002557). |
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10 |
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Only found in mouse. |
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11 |
human |
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Part of MUC12 |
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12 |
human |
|
fasta |
gcg |
domain |
5478 |
|
fasta |
plain |
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Chr7q22.1+ |
fasta |
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NCBI reference: PTS: AAD55679(mRNA: AF147790),
C-terminal: AAD55678(mRNA: AF147790). |
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13 |
human |
|
fasta |
gcg |
domain |
512 |
|
fasta |
plain |
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Chr3q21.2- |
fasta |
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NCBI reference: NP_149038(mRNA: NM_016885). |
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14 |
human |
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fasta |
gcg |
domain |
261 |
|
fasta |
plain |
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Chr4q23- |
fasta |
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NCBI reference: Q9ULC0(mRNA: NM_016242) |
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15 |
human |
|
fasta |
gcg |
domain |
334 |
|
fasta |
plain |
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Chr11p14.2- |
fasta |
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NCBI reference: CAD_10624(mRNA: AJ417818). |
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16 |
human |
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fasta |
gcg |
domain |
>22152 |
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fasta |
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Chr19p13.2- |
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Missing signal sequence. NCBI reference:
AAL65133(mRNA: AF414442). |
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17 |
human |
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fasta |
gcg |
domain |
4493 |
|
fasta |
plain |
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Chr7q22.1+ |
fasta |
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NCBI reference: CAE54435(mRNA: AJ606307). |
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18 |
human |
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MCAM(melanoma cell adhesion molecule ). NCBI
reference: NP_006491(mRNA: NM_006500). |
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19 |
human |
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fasta |
gcg |
domain |
>4858 |
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fasta |
plain |
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Chr12q12+ |
fasta |
|
PTS+Cterm, N-term is missing. NCBI reference:
AAP41817(mRNA: AY236870). Ensembl reference: Version 21.34d
:ENSP00000298914(DNA: ENSG00000165960), ENSP00000331564(DNA:
ENSG00000165960), ENSP00000331707(DNA: ENSG00000165960). |
20 |
human |
|
fasta |
gcg |
domain |
709 |
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fasta |
plain |
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Chr3q29+ |
fasta |
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NCBI reference: AAH44243(mRNA: BC044243). |
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21 |
human |
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fasta |
gcg |
domain |
566 |
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fasta |
plain |
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Chr6_cox_hap1 |
fasta |
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NCBI reference: BAF92842.1(mRNA: AB242595.1). |
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22 |
human |
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fasta |
gcg |
domain |
1773 |
|
fasta |
plain |
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Chr6_alt
HuRef |
fasta |
|
NCBI
Reference Sequence: AC_000138.1 Chromosome 6 (mRNA
gi|311771748|ref|NM_001198815.1) |
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HEG |
human |
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fasta |
gcg |
domain |
1333 |
|
fasta |
plain |
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Chr3q21.2- |
fasta |
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NCBI reference: BAA86551(mRNA: AB033063). |
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EXPLANTION OF ANNOTATION |
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