| Mucin | Species | Protein Sequence | Length | mRNA Sequence | DNA Sequence | Note | |||||||||||||||||||||||
| ciMucMV1 | ciona intestinalis | fasta | domain | >1334 | scaffold_609+, <0.1Mbp (v39.195b) | Lost PTS in version 40.2b. Ensembl reference: version 39.195b GENSCAN00000085991. | |||||||||||||||||||||||
| ciMucMV2 | ciona intestinalis | fasta | domain | 1098 | fasta | plain | scaffold_220-, ~0.1Mbp (v40.2b) | Two exons in PTS. Gap in 3rd VWD in genomic sequence. Ensembl reference: version 40.2b GENSCAN00000088682. | |||||||||||||||||||||
| ciMucMV3 | ciona intestinalis | fasta | domain | 1469 | scaffold_223-, <0.1Mbp (v39.195b) | Lost PTS and 3rd VWD in version 40.2b. Ensembl_reference: version 39.195b ENSCINP00000001406. | |||||||||||||||||||||||
| ciMucMV4 | ciona intestinalis | fasta | domain | 1275 | scaffold_16+, ~0.2Mbp (v39.195b) | Lost 1st VWD in version 40.2b. Ensembl_reference: version 39.195b ENSCINP00000016240. | |||||||||||||||||||||||
| ciMucMV5 | ciona intestinalis | fasta | domain | 3425 | fasta | plain | chr10q-, ~3.4Mbp (v40.2b) | One-exon PTS. Ensembl reference: version 40.2b GENSCAN00000090826. | |||||||||||||||||||||
| ciMucMV6 | ciona intestinalis | fasta | domain | 1769 | fasta | plain | scaffold_26-, ~0.3Mbp (v40.2b) | One-exon PTS. PTS is small. Ensembl reference: version 40.2b GENSCAN00000077236. | |||||||||||||||||||||
| ciMuc4 | ciona intestinalis | fasta | domain | 2643 | fasta | plain | chr6q-, ~2.2Mbp (v40.2b) | Eight exons in PTS. Ensembl reference: version 40.2b GENSCAN00000100929. | |||||||||||||||||||||
| ciMucMS | ciona intestinalis | fasta | domain | 5109 | scaffold_88-, ~0.1Mbp (v39.195b) | Lost SEA, VWD and TM in version 40.2b. 31 EGF domains. Ensembl reference: version 39.195b GENSCAN00000010060. | |||||||||||||||||||||||
| EXPLANATION OF ANNOTATION | |||||||||||||||||||||||||||||