Protein domain file:
SS
(Yellow background)
Signal sequence.
PTS (Light orange)
Mucin domain.
Rich of Pro, Ser, and Thr.
PTS (Red)
Mucin
domain repeats part.
PTS (Red, bold)
Mucin domain 1
typical repeat unit.
VWD (Lime)
von
Willebrand factor type D domain.
CysD/CysD’ (Pink)
Cys-rich
domain inserted in or around PTS domains.
SEA (Blue)
Domain found in Sea urchin sperm
protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side
chains.
CK (
Cys-knot domain. Comprises glycoprotein hormones
and the C-terminal domain of various extracellular proteins. It is
believed to be involved in disulfide-linked dimerisation.
TM
(Turquoise background)
Transmembrane domain.
NIDO (Pale blue)
Nidogen-like
domain, an extracellular domain found in nidogen and
hypothetical proteins of unknown function.
AMOP (Lavender)
This
domain may have a role in cell adhesion. It is called the AMOP domain after
Adhesion associated domain in MUC4 and Other Proteins. This domain is extracellular
and contains a number of cysteines that probably form disulphide bridges.
VWC (Pink background)
von
Willebrand factor type C domain.
Gray (-50%)
The part in splice variant which is different from main sequence.
mRNA plain file:
Each paragraph is one exon.
DNA plain file:
Green background: PTS exon.
Gray background(-25%): Other exon.
Green letters: UTR.
Pink letters: SNP.