Mucin |
Species |
|
Protein Sequence |
Length |
|
mRNA Sequence |
|
DNA Sequence |
|
Note |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
fMuc13 |
takifugu |
|
fasta |
|
domain |
>556 |
|
fasta |
plain |
|
scaffold_4926-, <0.1Mbp |
|
|
One-exon PTS. Gap before
PTS. Ensembl reference: version 39.4b GENSCANSLICE00000013724. |
|
|
|
|
|
|
|
fMuc2 |
takifugu |
|
fasta |
|
domain |
>1517 |
|
fasta |
plain |
|
scaffold_198+, ~0.5Mbp |
|
|
One-exon PTS. Gap after
PTS. Ensemblreference: version 39.4b NEWSINFRUP00000151694. |
|
|
|
|
|
|
|
fMuc5a |
takifugu |
|
fasta |
|
domain |
2227 |
|
fasta |
plain |
|
scaffold_273-, ~0.2Mbp |
|
|
One-exon PTS. Ensembl
reference: version 39.4b GENSCANSLICE00000022196. |
|
|
|
|
|
|
|
|
fMuc5b |
takifugu |
|
fasta |
|
domain |
1904 |
|
fasta |
plain |
|
scaffold_405+, <0.1Mbp |
|
|
One-exon PTS. Ensembl
reference: version 39.4b GENSCANSLICE00000024870. |
|
|
|
|
|
|
|
|
fMucMS |
takifugu |
|
fasta |
|
domain |
>1696 |
|
|
|
|
scaffold_3874-, ~0.1Mbp |
|
|
Gap before 1st PTS.
Ensembl reference: version 31.2f GENSCAN00000032685. Lost in version 39.4b. |
|
|
|
|
|
|
zMuc2 |
zebrafish |
|
fasta |
|
domain |
>2418 |
|
|
|
|
|
|
|
Ensembl reference:
version 31.4d GENSCAN00000030796. Lost in version 39.6. |
|
|
|
|
|
|
|
|
zMuc5a |
zebrafish |
|
fasta |
|
domain |
>1893 |
|
fasta |
plain |
|
chr15-,
57.14-57.16Mbp |
|
|
One-exon PTS-CysD. Gap
after PTS-CysD. Ensembl reference: version 39.6 GENSCAN00000001586. |
|
|
|
|
|
|
zMuc5b |
zebrafish |
|
fasta |
|
domain |
4098 |
|
fasta |
plain |
|
chr25+,
~37.9Mbp |
|
|
Three exons in PTS. Gap
in PTS. Ensembl reference: version 39.6 GENSCAN00000000341. |
|
|
|
|
|
|
|
zMuc5c |
zebrafish |
|
fasta |
|
domain |
>3304 |
|
fasta |
plain |
|
chr25+,
~37.8Mbp |
|
|
One-exon PTS-CysD. Gap
after PTS-CysD. Ensembl reference: version 39.6
GENSCAN00000000347+GENSCAN00000000357. |
|
|
|
|
zMuc5d |
zebrafish |
|
fasta |
|
domain |
>761 |
|
fasta |
plain |
|
chr15+,
57.12-57.13Mbp |
|
|
One-exon PTS. Gap before
PTS. Ensembl reference: version 39.6 ENSDARP00000031384. |
|
|
|
|
|
|
|
zMuc5e |
zebrafish |
|
fasta |
|
domain |
>1315 |
|
fasta |
plain |
|
Zv6_NA577+,
<0.1Mbp |
|
|
Two exons in PTS. Ensembl
reference: version 39.6 FGENESH00000075531. |
|
|
|
|
|
|
|
|
zMuc5f |
zebrafish |
|
fasta |
|
domain |
>977 |
|
fasta |
plain |
|
chr20+,
~50.9Mbp |
|
|
Three exons in PTS.
Ensembl reference: version 39.6 ENSDARP00000069268. |
|
|
|
|
|
|
|
|
zMuc13a |
zebrafish |
|
fasta |
|
domain |
>2450 |
|
fasta |
plain |
|
chr1-,
~55.0Mbp |
|
|
Two exons in PTS. Ensembl
reference: version 39.6 GENSCAN00000014636. |
|
|
|
|
|
|
|
|
zMuc13b |
zebrafish |
|
fasta |
|
domain |
>448 |
|
fasta |
plain |
|
chr12-,
~14.0Mbp |
|
|
Multiple exons in PTS
and each exon encodes one tandem repeat unit. Gap in PTS. NCBI reference:
XP_691646. |
|
|
|
|
|
zMucMS1 |
zebrafish |
|
fasta |
|
domain |
2455 |
|
fasta |
plain |
|
chr1+,
~55.0Mbp |
|
|
One exon PTS for both PTS
domains. Ensembl reference: version 39.6 FGENESH00000062706. |
|
|
|
|
|
|
|
zMucMS2 |
zebrafish |
|
fasta |
|
domain |
6557 |
|
fasta |
plain |
|
chr1+,
~62.2Mbp |
|
|
Ten big exons encode all
PTS-SEA. Gap in PTS-SEA. Ensembl reference: version 39.6 GENSCAN00000025714. |
|
|
|
|
|
zMucMS3 |
zebrafish |
|
fasta |
|
domain |
2908 |
|
fasta |
plain |
|
chr3-,
~41.5Mbp |
|
|
Each PTS one exon. Gap
before 1st PTS. Ensembl reference: version 39.6 FGENESH00000078841. |
|
|
|
|
|
|
zMucMS4 |
zebrafish |
|
fasta |
|
domain |
2450 |
|
fasta |
plain |
|
chr7+,
~1.3Mbp |
|
|
Each PTS one exon. Gap in
PTS-SEA. Ensembl reference: version 39.6 GENSCAN00000003081. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
EXPLANATION OF ANNOTATION |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|